Gene Expression Colormap Matlab script

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  • Version:
  • File size: 0 KB
  • File name: exp_colormap.m
  • Last update:
  • Platform: Windows / Linux / Mac OS / BSD / Solaris
  • Language: Matlab
  • Price:Freeware
  • Company: Michael Driscoll (View more)

Gene Expression Colormap script description:



Gene Expression Colormap is a Matlab script for Bio-Informatics scripts design by Michael Driscoll. It runs on following operating system: Windows / Linux / Mac OS / BSD / Solaris.
Gene Expression Colormap returns a colormap for visualizing gene expression.

Publisher review:
Gene Expression Colormap returns a colormap for visualizing gene expression. A simple function that returns a colormap, C, for visualizing gene expression. C is just a N x 3 matrix [R G B] describing the range of color values.Example usage:C = exp_colormap('blue-yellow',64);colormap(C);Called without any arguments, it returns a [3 x 64] green-red colormap.Options for 'colors' are:'blue-yellow''green-red''yellow''N' represents the number of degrees of color to use. the default is 64.Generally speaking, the two-colored maps are appropriate for visualizing expression data which is normalized to a reference condition, e.g. to show whether expression is lower (blue or green) or higher (yellow or red) than the reference.The single-color yellow map ('yellow') is appropriate for displaying levels of gene expression which are not compared (necessarily) to a single reference, and this is similar to the colormap used in the D-chip expression analysis software.The colormaps returned range monotonically.
Operating system:
Windows / Linux / Mac OS / BSD / Solaris

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